Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNNLRDFIEALEKKRDLIRIKKEVSTILEMTEIHRRVSLNKGPAIIFENVVTENGKSVIPVLVNLFGTIERIAFGLNISPGELRDLGKLLAFLQSPEPPKNLKDVIKMFPLLKVVLSMRSKIVNKAPCQEVV---LTGDDVDLSLLPIQTCWPNEPAPLITWPIVITKGPTEDKQDNFNLGIYRMQVMDKKTTLMRWLAHRGGASHHKRWKENGRSIKFPAAAVIGSDPATLIAAVTPVPETLSEYQFAGLLRKKPLELVNCKTISLQVPAHAEIVLEGYVSLDSYRNEGPYGDHTGYYNSVEQFPEFNITAITMRKNPIYLSTFTGKPPDEPSILGEALNEIFVPILINQFPEIVDFYLPPEGCSYRIAVVSVKKSYPGHAKRIIMGIFSFLKQFLYTKFIIVVDDDINIRDWKEVMWAISTRMDPVRDTVMIENAPIDYLDFASPESGLGGKMGFDATNKMPPETKREWGKKIEMSEEIVKKVTEKWDEYGLTDD |
| 3AFJ Chain:A ((246-337)) | ------------------------------------------------EASVPRAGKSADSVASGWY-PIGSHSVAVTLQPGESRDLVYVLGYLENPDEEKWADDA--------------HQVVNKAPAHALLGRFATSEQVDAALEALNSYWTNLLSTYSVSSTDEKLDRMVNIWNQYQCMVTFNMSRSASFFETGIGRGMGFRDSNQDLLGFVHLIPERARERIIDIASTQFADGSAYHQYQPLTKRGNNDIGSGFNDDPLWLIAGVAAYIKESGDWGILDEPVPFDNEPGSEVPLFEHLTRSFQFTVQNRGPHGLPLIGRADWNDCLNLNCFSTTPGESFQTIENQAGGVAESVFIAAQFVLYGAEYATLAERRGLADVATEARKYVDEVRAAVLEHGWDGQWFLRAYDYYGNPVGTDAKPEGKIWIEPQGFAVMAGIGVGEGPDDADAPAVKALDSVNEMLGTPHGLVLQYPAYTTYQIELGEVSTYPPGYKEN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3246 for 356 contacts (9.1/contact) +
2D Compatibility (PS) -9094 + (NN) -1199 + (LL) 6032
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -6065.0 ( -17.04 by residue)
QMean score : -0.061
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