Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHVAIY-MLLLC-MS-AMLYRIAKLSDIYNKALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL-----
1ZX3 Chain:A ((10-95))
EVQQPDPMRKNWIMENMDSGVIYLLESWLKAKSQETGKEISDIFANAVEFNIVLKDWG--KEKLEETNTEYQNQQRKLRKTYIEYYDR
General information:
TITO was launched using:
RESULT:
Template:
1ZX3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30847 for 361 contacts (-85.4/contact) +
2D Compatibility (PS) -7805 + (NN) -1835 + (LL) 368
1D Compatibility (HY) 6400 + (ID) 150
Total energy: -33869.0 ( -93.82 by residue)
QMean score : -0.004
(partial model without unconserved sides chains):
PDB file :
Tito_1ZX3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZX3-query.scw
PDB file :
Tito_Scwrl_1ZX3.pdb
: