Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGSIFIFLGICLVTISTIGVIRFTDFYTRLHAAGITDSSGAMLLLIGLALQNEFSVNTVKIVLLIFIIWVANSTNSYILARTHYKSKEKAIKES
1ETF Chain:B ((1-23))
------------------------------------------------------------------------DTRQARRNRRRRWRERQRAAAAR
General information:
TITO was launched using:
RESULT:
Template:
1ETF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7142 for 98 contacts (72.9/contact) +
2D Compatibility (PS) -2453 + (NN) -302 + (LL) 7156
1D Compatibility (HY) 1200 + (ID) 100
Total energy: 12643.0 ( 129.01 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_1ETF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ETF-query.scw
PDB file :
Tito_Scwrl_1ETF.pdb
: