Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKALIFTSLVVVVLIVVTFLYKNNETNDLQVVNVYSSRKEELVRTLFDEFTRNTGIKVR--YIIDDYSQLLSRMENGSGTDVFLTADAVNLILAKKRGLLSQVNSEILKRAIPEKFRDSEGYWFGLTKRTRILVYNKESVDPKDLSTYEDLANKKWKGKILVRSSTSPYNRSLIAFMIANNGFEKTKEWVSGIVSNMARKPSGGDTNQIYAVAAGEGDIAIVNSYYFARILSSER-ENKKNVANKLGVFFPNHDSNGVMVNISGAAVTKNAKNRENAIALLEFLVSKQAQELYAKKNQEYPIIEGVEVSNILKFWGDYPQSDLPLSELEKHLFEAVMIADECKWK |
2OWT Chain:A ((8-318)) | --------------------------------VSLYTTREPKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEGDKSPADVLMTVDIGNLIDLVNGGVTQKIQSQTLDSVVPANLRGAEGSWYALSLRDRVLYVEKDL--KLDSFRYGDLADPKWKGKVCIRSGQHPYNTALVAAMIAHDGAEATEKWLRGVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFA-GGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAEIAKYRKQASELVDKVGFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152404 for 2648 contacts (-57.6/contact) +
2D Compatibility (PS) -33946 + (NN) -23854 + (LL) 3656
1D Compatibility (HY) -22000 + (ID) 5550
Total energy: -234098.0 ( -88.41 by residue)
QMean score : 0.556
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