Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKYKNIGYVASESPKSQEVSKLLQKLNFINITEENKSEVD-----LLVVVGGDGLMLHTLHNYVVGNKDIHVYGVNTGSVGFLMNKYFSSSEDLIDNIEHATSAQLT--LLKMEAIDLSGKK-YHHVAVNEVYVFRKANQIVEMNVAINSKLKMEKFRGDGIILSTPTGSTAYNFSAGGPILPLNSNLFALTSINSYYPRHWNGALISNDTIVQIDINNAQNRPALVVSDYKELHNISQIKMQKDHENTVTLLFDKDYSLDERIFDRQFLY |
| 4DY6 Chain:A ((8-186)) | ---------------KGDEKSDLL-RLNMIAGFGEYDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPLLKTTVKY-----EATYLALNESTVKSSGGPFV-VDVVIND-IHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVNDKDFQISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DY6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72297 for 1089 contacts (-66.4/contact) +
2D Compatibility (PS) -18219 + (NN) -5395 + (LL) 1152
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -109159.0 ( -100.24 by residue)
QMean score : 0.264
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