Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEIDYHKITIVMTNGQEFETRSTYGKEGDKIKLDRDPLTHPAWTGSLTSGSTNKTSKIAKFNDKYGNIF
4H13 Chain:C ((172-193))
-----------------------------------------------FTASATGTITKIAKEEDEYGNVK
General information:
TITO was launched using:
RESULT:
Template:
4H13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 862 for 55 contacts (15.7/contact) +
2D Compatibility (PS) -2301 + (NN) -1006 + (LL) 2520
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -1625.0 ( -29.55 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4H13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H13-query.scw
PDB file :
Tito_Scwrl_4H13.pdb
: