Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTILFNRNNFRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRYNTKHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALRG-REIGFPTINIP---IEDCMIKPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIFD-FNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL |
| 1NB9 Chain:A ((5-125)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKM----------------------------------VVSIGWNPYYKNTKKSM-ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71630 for 756 contacts (-94.7/contact) +
2D Compatibility (PS) -12270 + (NN) 1498 + (LL) 12376
1D Compatibility (HY) -9200 + (ID) 2150
Total energy: -81376.0 ( -107.64 by residue)
QMean score : 0.445
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