Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTRFAPSPTGYLHVGNARTALVCWMYTRSQNGKFLLRFDDTDLQRSDVKHIDSIVQDLRWICIDWD---------VIFKQSERFKHYNEVFLQLITKGHIYACYETKEELDIKRKLQLKHGLPPVYDRSALLLTEQEKFCYEQEGRKPH-FRFKLDRNEVVKWNDEVKGEINIATSSISDPVVKREDGIYTYMLPSVIDDVDFNVTHVIRGEDHVTNTAVQIQMIQALEAKVPVFAHLPLL-HFDDSKISKRKGGLDIKSIKENEIEPMALASYLIKLGTSDPIEAYV-NMQSLIDSFDIKKFGSASAQFNLSEIHKLNSKVLQQ-MPFEMVKER----LSQIGVNSPEFWYFIR---------NNIEKFSEVAEWWQICKSNIEPVVLDK--EFIKIVLDALP----QGDCNENTLSEWVKAIQQTVDIKLKDLFMQLRLALTGAKTGPELAKLLIFIGKENIIARLKKY |
| 1N78 Chain:A ((2-465)) | VVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALKWLGLSYDEGPDVGGPHGPYRQSERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKE--KGG----YDGRARNIPPEEAEERARRG-EPHVIRLKVPRPGTTEVKDELRGVVVYDNQEIPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFGWEAPRFYHMPLLRNPDKTKISKRKSHTSLDWYKAEGFLPEALRNYLCLMGFSMPDGREIFTLEEFIQAFTWERVSLGGPVFDLEKLRWMNGKYIREVLSLEEVAERVKPFLREAGLSWESEAYLRRAVELMRPRFDTLKEFPEKARYLFTEDYPVSEKAQRKLEEGLPLLKELYPRLRAQEEWTEAALEALLRGFAAEKGVKLGQVAQPLRAALTGSLETPGLFEILALLGKERALRRLERA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209370 for 3253 contacts (-64.4/contact) +
2D Compatibility (PS) -46031 + (NN) -14665 + (LL) 484
1D Compatibility (HY) -24800 + (ID) 6800
Total energy: -301182.0 ( -92.59 by residue)
QMean score : 0.494
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