Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINWQAKDPEGNSINCSMTVKVGSGGIQSATGGFGVSKFKSPLPEGKKSEILKLVEQ--NKEVF-ISGKTLYKAFTDVGQSVDD
3DFR Chain:A ((79-109))
------------------------------------------------VAAVFAYAKQHLDQELVIAGGAQIFTAFKDDVDTLLV
General information:
TITO was launched using:
RESULT:
Template:
3DFR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4953 for 100 contacts (-49.5/contact) +
2D Compatibility (PS) -3151 + (NN) -981 + (LL) 1188
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -10197.0 ( -101.97 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3DFR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DFR-query.scw
PDB file :
Tito_Scwrl_3DFR.pdb
: