Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSGESLSESGSQVAYNMRKMIREKISDGYTDEQITSELRNSYGDSIIIVPPVKFSTYILWLIPLVIPLIGCFLIRNIIK
2KW0 Chain:A ((21-99))
---------------------DVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23776 for 525 contacts (-45.3/contact) +
2D Compatibility (PS) -9106 + (NN) -7638 + (LL) 5048
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -38422.0 ( -73.18 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_2KW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KW0-query.scw
PDB file :
Tito_Scwrl_2KW0.pdb
: