Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------MIQLLTKFFNLSSSKVELGIEVDHATVPWKGWLNGGQINLLLDMVDHQL-GVLLGLEVGSY----------------------------------------------------------------------------------------------------------------------------- |
| 3K85 Chain:A ((2-342)) | LVRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYCTIEETNSGRIEINAYDAQCCKSYLSMSQLEIDGEASLIKGVYNRIIRDYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFIEWLSLPLGDYETSRLAYEIERKDLGLSGGKQDQYAAAFGGFNYMEFLQNDLVIVNPLKMKRWIVDELESSMVLYFTQTAIEAMHKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKEAFDVATGAGAMAGKVSGAGFIMFVVEPTRKEEVVRALNNLNGFVMPFQFIDDGAHGWKIYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4958 for 328 contacts (-15.1/contact) +
2D Compatibility (PS) -5944 + (NN) -604 + (LL) 0
1D Compatibility (HY) 4000 + (ID) 150
Total energy: -7656.0 ( -23.34 by residue)
QMean score : -0.052
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