Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLVGKDTRLICQGFTGAQGTFHSEQAISYGTKMVGGVTPGKGGSSHLNLPVFNTVAEAKEKTDANATVIYVPAKFAAAAILEAIDAEIELIVCITEGIPILDMVRVKHALISSKSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGPGQSTCIGIGGDPIHGMTFVDCMELFLKDEDTHGIVVIGEIGGNEEEDVSHFVKTEKTKKPIVGFIAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMSSAGIAIAETPAMIGKKILEVMHKAHVA
1OI7 Chain:A ((2-286))
--ILVNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVK-DHMKKPVVGFIGGR------------------VGTPESKLRAFAEAGIPVADTI----DEIVELVKKALG-
General information:
TITO was launched using:
RESULT:
Template:
1OI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -219957 for 2481 contacts (-88.7/contact) +
2D Compatibility (PS) -30127 + (NN) -22282 + (LL) 1124
1D Compatibility (HY) -24000 + (ID) 7200
Total energy: -302442.0 ( -121.90 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1OI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OI7-query.scw
PDB file :
Tito_Scwrl_1OI7.pdb
: