Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNTDQQQGLDSKEKSSEDLKPEKKREMKEAAAELKEGIKKSGAGNQSVGTEVSNQATTQDIDNSKTMEH
1A5Z Chain:A ((289-310))
-----------------LNLNEEELEAFRKSASILKNAINEITAEEN-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1A5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5016 for 79 contacts (63.5/contact) +
2D Compatibility (PS) -2638 + (NN) -2621 + (LL) 1428
1D Compatibility (HY) 800 + (ID) 150
Total energy: 1835.0 ( 23.23 by residue)
QMean score : 0.737
(partial model without unconserved sides chains):
PDB file :
Tito_1A5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A5Z-query.scw
PDB file :
Tito_Scwrl_1A5Z.pdb
: