Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKIATWNVNSIRK-RVDQLCSFIVDDQIDIILLQEIKCTEEQFPYVEIEKLGYECIVYGEVAR--NGVCVLSKHPILEKFKIDIVEGYQEARY-IECLIK-HNNQKMRVVSIYVPNGQSLGSHVFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKLKAILNLGFKDAFRMSHPNLQQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYIDDRLRKLENPSDHTPIVSIMEW
3W2X Chain:A ((6-254))
VLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVP-----PSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGK-MSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWILSDVMG----SDHCPIGLEIEL
General information:
TITO was launched using:
RESULT:
Template:
3W2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121331 for 1903 contacts (-63.8/contact) +
2D Compatibility (PS) -25899 + (NN) -11276 + (LL) 712
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -175794.0 ( -92.38 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3W2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W2X-query.scw
PDB file :
Tito_Scwrl_3W2X.pdb
: