Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEEINIMNDFTNNNNSSDSSIFQGKICPEDLNKAQEVNELKGVTEELFKKIELQKQEYEGLGKEASSEIQGMFTPVMLGDDNPTDGGIVEETLAELGKFFQSLLSEFEIELDPKTYEMINGKREKNWLAAIIKFLHDKLKELVEKVFSCDLSFDERVDKEIKELEEKLLSGGFSKEEEVAVLGKLEALRELKLKLQMAVAGWIVAMVAEIFAVELVVAAEGTGTAKEEDKKAEKTSSKKEVEVCKEIGIKVGED-EKLRI-LPISLFLIPARGQSNRLIIPPLKPEEQNLLRDSLKKMI--HGPEHDVNRENCEVKETKVEENKQVEELIAVRPTASGQPATNSMELKDTQRDNSDWKEMKGQGKNNTCKKTLRQSNRGFVSNDNTSRRPAQSSVFSRETPEQLAQEYVFNGEASTQHATKSVSNRGSSGQPMKGSVVGSEYDFSTWSNAEYEAQQSSVNNAQPTSECNDVKVNNHVNSMGRAQGEAQSR |
2V26 Chain:A ((361-436)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNKSTQALEYCAEL---LGLDQDDLRVSLTTRVM-----------IKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11052 for 278 contacts (-39.8/contact) +
2D Compatibility (PS) -6313 + (NN) -1014 + (LL) 18816
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -4863.0 ( -17.49 by residue)
QMean score : 0.406
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