Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKEIKTKTKERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY
4KAW Chain:X ((2-183))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSGITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLE-
General information:
TITO was launched using:
RESULT:
Template:
4KAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94010 for 1324 contacts (-71.0/contact) +
2D Compatibility (PS) -19971 + (NN) -6498 + (LL) 128
1D Compatibility (HY) -9600 + (ID) 2950
Total energy: -132901.0 ( -100.38 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_4KAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KAW-query.scw
PDB file :
Tito_Scwrl_4KAW.pdb
: