Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------MLVCMCFKVLKTLKIGCTEKPHLLKL-----------------------------------------------
1ZZA Chain:A ((1-90))
GSMSIMDHSPTTGVVTVIVILIAIAALGALILGCWCYLRLQRISQSEDEESIVGDGETKEPFLLVQYSAKGPCVERKAKLMTPNGPEVHG
General information:
TITO was launched using:
RESULT:
Template:
1ZZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 574 for 100 contacts (5.7/contact) +
2D Compatibility (PS) -2621 + (NN) -3191 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -9088.0 ( -90.88 by residue)
QMean score : 0.096
(partial model without unconserved sides chains):
PDB file :
Tito_1ZZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZZA-query.scw
PDB file :
Tito_Scwrl_1ZZA.pdb
: