Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRDLTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYVSDEGKDEFNYKNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSIQFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETLTLNQPAPPHHFSQMKKINQFGMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
| 2Q42 Chain:A ((10-169)) | -------KDNYA---YILHDEDTGTVGVVDP-SEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMDKDR-----IPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFP----GSR---AIFTGDTMFSLSCGKL--------FEGT----PKQMLASLQKITSLPDDTSIYCGH--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77655 for 1349 contacts (-57.6/contact) +
2D Compatibility (PS) -17488 + (NN) -9272 + (LL) 7344
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -107471.0 ( -79.67 by residue)
QMean score : 0.432
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