Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFNQSDKFEQLKKKILGISFNLPEGEEFTFHDLNSRANVQCSKAVQQNVGRWFAYFVKHAPRVPFIIIGKDTHGHLVYLKTGPNPHYNSNPSKGGVR
2J0V Chain:A ((102-124))
---------------------------------------------------KWMPELRRFAPNVPIVLVGTKLD------------------------
General information:
TITO was launched using:
RESULT:
Template:
2J0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6993 for 71 contacts (-98.5/contact) +
2D Compatibility (PS) -2602 + (NN) -2462 + (LL) 3088
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -11669.0 ( -164.35 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_2J0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J0V-query.scw
PDB file :
Tito_Scwrl_2J0V.pdb
: