Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRVSYSVETKYKAVEMKA-AGFSTKEIMKELNIKNRTQVETWWRWYRNGESYRFSQHVGKQYTYGKGLEELSEVEQLKLENKRKDIELDILKKYKALERKWYQQ
2COB Chain:A ((10-59))
-RYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPH-STLEYKVKERLGTLK-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2COB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9848 for 301 contacts (-32.7/contact) +
2D Compatibility (PS) -5445 + (NN) -2581 + (LL) 4720
1D Compatibility (HY) 0 + (ID) 300
Total energy: -13454.0 ( -44.70 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_2COB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2COB-query.scw
PDB file :
Tito_Scwrl_2COB.pdb
: