Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQGWWFPVMASAFLIFTIVIMFIAGTGQYGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNKGMISDTILHFSSSIVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNVRYSHWLRFVWPVVAFVLIFGGGLLITQVLIYS |
| 1NXH Chain:A ((24-37)) | ---------------------------------------------------------------------------------------------------------------------VVKPLSRELEIDVE--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -495 for 47 contacts (-10.5/contact) +
2D Compatibility (PS) -1372 + (NN) -897 + (LL) 15468
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 10954.0 ( 233.06 by residue)
QMean score : -0.169
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