Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIMFVLCGFIFPLTVTALGQV-----LFPEQANGSLVKQDGKVIGSKLIGQQWTEPKYFHGRISAVNYNMNANEVKESGGPASGGSNYGNSNPELKKRVQETIKQEGKKISSDAVTASGSGLDPDITV
4WWL Chain:A ((422-474))
--------------LTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTY--RMATLNFN-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1513 for 216 contacts (-7.0/contact) +
2D Compatibility (PS) -4973 + (NN) 772 + (LL) 2792
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -7372.0 ( -34.13 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_4WWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WWL-query.scw
PDB file :
Tito_Scwrl_4WWL.pdb
: