Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKYYTKEEVVISTLQTLASKFEDLDIDSHDNLNSFKARIGSTIDKLAKAPPLNKYTFTELMIIISIIYFKNLYIGRLDKPSSRKKKGGNLIFEIVYNNQMLNSSTAKL
1J27 Chain:A ((22-43))
-------KRALIKPALERLKARFP-VSAAR--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3589 for 85 contacts (-42.2/contact) +
2D Compatibility (PS) -2155 + (NN) 23 + (LL) 5536
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -1985.0 ( -23.35 by residue)
QMean score : 0.758
(partial model without unconserved sides chains):
PDB file :
Tito_1J27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J27-query.scw
PDB file :
Tito_Scwrl_1J27.pdb
: