Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVIIIFFSIGLILTTHIIIDKIKSNTK
3MNW Chain:P ((2-19))
QEKNEQELLELDKWASLWN------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 977 for 62 contacts (15.8/contact) +
2D Compatibility (PS) -1810 + (NN) -431 + (LL) 4848
1D Compatibility (HY) -400 + (ID) 200
Total energy: 2984.0 ( 48.13 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_3MNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MNW-query.scw
PDB file :
Tito_Scwrl_3MNW.pdb
: