Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDMLISLVIPVFALLVIGGIIWVIIEGIVHISKKNKAIDNFLNQVNKVSETYKFATAFLFLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPLYKQKKKKQTFKKYMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLIVAKKATNKNKEIETVDNTNITER |
| 1PSM Chain:? ((1-38)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------EAYKKAKQASQDAEQAAKDAENASKEAEEAAKEAVNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -395 for 143 contacts (-2.8/contact) +
2D Compatibility (PS) -3787 + (NN) 385 + (LL) 15208
1D Compatibility (HY) 4400 + (ID) 400
Total energy: 15411.0 ( 107.77 by residue)
QMean score : -0.052
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