Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLSITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK |
| 3MP7 Chain:B ((18-38)) | -----------------------------------------------------------------------------------FLVTKKPNWATYKRAAKITG--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9860 for 70 contacts (140.9/contact) +
2D Compatibility (PS) -2042 + (NN) 273 + (LL) 12988
1D Compatibility (HY) -800 + (ID) 100
Total energy: 20179.0 ( 288.27 by residue)
QMean score : 0.519
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