Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLRDTTFLSYLFTIILWGSAFPMIKIALNDFSAESLSAFRLIL------ATIILLPF--------------VIIKKLPTPELRDIPVIFILGFCGFVIYHTALNFGETLISAGISGILVSTTPIFSSALAYIFLKEHFSKWNWLSSLVAFIGISIISISKDDYTTINVLGVFIILLASFSESLYFTFQKKYIEKYGFIAFTLYTIMASSPFMLIFIPEIINDIHGATF----TSIVSVLYLAIFPTIIPYVLLAYIVKSVGVSDATMSLYLTPIVSLLLSYLLLDE-LPTTLAIIGGIITLLGVSLSNFFQNT- |
| 4AW9 Chain:A ((1-263)) | ---------GGKHWVVIVAGSN----GWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGP---QDHVFIYFTDHGST-------------GILVFPNEDLH-----------VKDLNETIHYMYKHKM-----YRKMVFYIEACESGSMMNHLPDNIN-VYATTAANPRESSYACYYDEKRSTYLGDWYSVNWMEDSDVEDLTKE-------TLHKQYHLVKSHTQTSHVMQYGNKTISTMKVMQFQGMKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309305 for 2061 contacts (-150.1/contact) +
2D Compatibility (PS) -24803 + (NN) -2463 + (LL) 4820
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -340651.0 ( -165.28 by residue)
QMean score : 0.304
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