Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIRSFTILSLLIYLAMMCYTVVTYSKLPTKVPIHYNLAGDADNFADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQHHHQLNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ |
| 1CDL Chain:E ((2-20)) | ---------------------------------------------------------------------------RRKWQKTGHAVRAIGRLSS--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1498 for 67 contacts (22.4/contact) +
2D Compatibility (PS) -1871 + (NN) 1673 + (LL) 14316
1D Compatibility (HY) 0 + (ID) 250
Total energy: 15366.0 ( 229.34 by residue)
QMean score : -0.067
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