Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPY---IEYDWLQKGAFISNI-----SIMDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
1X7D Chain:A ((74-322)) | -----------------------------------------------------------------------------------HPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGNGAQSEFQALAFHKHLG-IEEIVAYDTDPLATAKLIANLKEYS-GLTIRRASSVAEAVKGVDIITTVT-ADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNARVFV--EYEPQTRIEGEIQQLPADFPV------VDLWRVLRGETEGRQSDSQVTVFDSVGFALEDYTVLRYVLQQAEKRGMGTKIDL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1X7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132363 for 1878 contacts (-70.5/contact) +
2D Compatibility (PS) -25695 + (NN) -12779 + (LL) 5688
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -182149.0 ( -96.99 by residue)
QMean score : 0.523
|
|
|