Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVSFSFNIVQYFLMIASVGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLFLALTVFAMYMVVITIFIDDYYLIFLLQGIYIIGAALDISWFYAGTEKFKIPSLSNIVA--SGIVLSVVVIFVKDQSDLSLYVFTIAIVTVLNQLPLFIYLKRYISFVSVNWIHVWQLFRSSLAYLLPNGQLNLYTSISCVVLGLVGTYQQVGIFSN------AFNILTVAIIMINTFDLVMIPRITKMSIQQSHSLTKTLANNMNIQLILTIPMVFGLIAIMPSFYLWFFGEEFASTVPLMTILAILVLIIPLNMLISRQYLLIVNKIRLYNASITIGAVMNLVLCLVLIYFYGIY-GAAIARLITEFILLIWRFVDITKINVKLNIVSTIQCVIAAVM----------MFIVLGVVNHYLPPTMYATLLLIAIGIVVYLLLMMTMKNQYVWQILRHLRHKTI |
| 4R6H Chain:A ((28-421)) | -ADTAKKTLTIYSTM----STDSERDTFRKLAAAFEKEH-----------------SDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGW-GKIRYGEYTADLR----------------------DMKWTQDLD-----PNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWF-----AGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEKLINIDAVTA----KKSQLIELMAQN---KIAFTMQ-----------------GGTLGQDVAQIN-PNVKVGIIPTPA------------IHPGDDPIWIGGER---------YTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -445763 for 3139 contacts (-142.0/contact) +
2D Compatibility (PS) -37134 + (NN) 16410 + (LL) 11800
1D Compatibility (HY) 1200 + (ID) 3350
Total energy: -456837.0 ( -145.54 by residue)
QMean score : 0.171
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