Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQEIAKYNVHTKAHKRKLIKRWLIAIVVLAIIIWAFAGVPSLELKSKSLEILKSIFSGLFHPDISYIYIPDGEDLLRGLLETFAIAVVGTFIAAIICIPLAFLGANNMVKLRPVSGVSKFILSVIRVFPEIVMALIFIKAVGPG-------------------------SFSGVLALGIHSVGMLGKLLAEDIEGLDFSAVESLKASGANKIKTLVFAVIPQIMPAFLSLILYRFELNLRSASILGLIGAG--G-------------IGTPLIFAIQ----TRSWDRVGIILIGLVLMVAIVDLISGSIRKRIV |
| 3RLF Chain:F ((276-503)) | --------------------------------------------------------------------------PFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEA---LRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140324 for 1224 contacts (-114.6/contact) +
2D Compatibility (PS) -19451 + (NN) -9981 + (LL) 8100
1D Compatibility (HY) -16800 + (ID) 1250
Total energy: -179706.0 ( -146.82 by residue)
QMean score : 0.430
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