Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQIEFKNVSKVYPNGH---VGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGEIFIQGKSITKAHGKALLEMRRN-IGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKY-NQRSDELSGGQQQRISIARALCQESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVFSEIYGRTIKEDEKLGVN
1F3O Chain:A ((2-223))
---IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLI-----FKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLKDGEV-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1F3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126794 for 1752 contacts (-72.4/contact) +
2D Compatibility (PS) -23204 + (NN) -4494 + (LL) 1696
1D Compatibility (HY) -15600 + (ID) 4500
Total energy: -172896.0 ( -98.68 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_1F3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F3O-query.scw
PDB file :
Tito_Scwrl_1F3O.pdb
: