Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEKERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQQLVDKINDTQHIITEVYLNITKGLNNREIQKKLIEYKQTLYEAQQQLYQYDSQNRDSMYASFDGKIMIKNIDN---DSDNQPILYLISK-ESHIKTSVTEFDLNKVKKGDKVNLSITSTGKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSISASPIFKSNNNSELSKYGVIIDDLSLPIRAGYSLEIKVPLNAIKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGDIIVEKGLKPGDKLIKQPKSTMNDGDKVEISS |
| 2EJM Chain:A ((4-97)) | ------------------------------------------------GSSGVSSQETQGGPL-APMTGTIEKVFVKAGDKVKAGDSLMVMIAMKM---------------------------------------------------------EHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEESDKRESESGPS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15598 for 528 contacts (-29.5/contact) +
2D Compatibility (PS) -9571 + (NN) -2652 + (LL) 18444
1D Compatibility (HY) 1200 + (ID) 700
Total energy: -8877.0 ( -16.81 by residue)
QMean score : 0.509
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