Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNDLLVMSVVYILTSVIMFYINGLSKQFFTYVVGFPIIYFGYICLVNLIKKRSRNN
1BH1 Chain:? ((1-26))
-------------------------------GIGAVLKVLTTGLPALISWIKRKRQQ-
General information:
TITO was launched using:
RESULT:
Template:
1BH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8149 for 111 contacts (-73.4/contact) +
2D Compatibility (PS) -2399 + (NN) 2795 + (LL) 3080
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -6073.0 ( -54.71 by residue)
QMean score : -0.037
(partial model without unconserved sides chains):
PDB file :
Tito_1BH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BH1-query.scw
PDB file :
Tito_Scwrl_1BH1.pdb
: