Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSP--YQGYAS--------IHNKPFPE----GWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQKDHKLVMLFGDNLLDFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 1Z88 Chain:A ((37-180)) | ---------------------------------------------------------------------------------------------GRPPMAVGFDIDDTVLFSSPGFWRGKKTYSPDSDDYLKNPAFWEKMNNGWDEF-----SIPKEAARQLIDMHVRRGDSIYFVTGRSQTKTETVSKTLADNFHIPAANMNPVIFAG--DKPEQNTRVQWLQEKNMRIFYGDSDNDITAARDC------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3235 for 916 contacts (3.5/contact) +
2D Compatibility (PS) -13676 + (NN) -2562 + (LL) 11472
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -10431.0 ( -11.39 by residue)
QMean score : 0.343
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