Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGVMLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIVTQSVMIGIMSGLMSFGIIGAYSIIFPLT---FKFGA------ENSNVIMIVASILLLFSFVVFFFIYGMVSGASALEFEKISTEGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL |
| 3G60 Chain:A ((708-768)) | ----------------------------------------------------------------------------------------------------------VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43697 for 275 contacts (-158.9/contact) +
2D Compatibility (PS) -5055 + (NN) 1143 + (LL) 14828
1D Compatibility (HY) -7200 + (ID) 900
Total energy: -40881.0 ( -148.66 by residue)
QMean score : 0.163
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