Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS
3H2A Chain:A ((39-291))--KTLIMGILNVTPDSFS--GSYNEVDAAVRHAKEMRDEGAHIIDIGG----------SVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVL--DLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAM-----------


General information:
TITO was launched using:
RESULT:

Template: 3H2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133559 for 2102 contacts (-63.5/contact) +
2D Compatibility (PS) -26760 + (NN) -22511 + (LL) 952
1D Compatibility (HY) -20000 + (ID) 5400
Total energy: -207278.0 ( -98.61 by residue)
QMean score : 0.694

(partial model without unconserved sides chains):
PDB file : Tito_3H2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H2A-query.scw
PDB file : Tito_Scwrl_3H2A.pdb: