Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENK----ELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
2DFS Chain:A ((1006-1076))
----------------------EKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDER------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DFS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21241 for 259 contacts (82.0/contact) +
2D Compatibility (PS) -7573 + (NN) -6553 + (LL) 3040
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: 7955.0 ( 30.71 by residue)
QMean score : 0.777
(partial model without unconserved sides chains):
PDB file :
Tito_2DFS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DFS-query.scw
PDB file :
Tito_Scwrl_2DFS.pdb
: