Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIYFSFTGNVRRF--------IKRTELENTLEITAENCMEPVHEPFIIVTGTIGFGEVPE--PVQSFLEVNHQYIRG--VAASGNRNWGLNFAKAGRTISEEYN--------VPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
2FLV Chain:A ((1-138))
MKIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWG--DGKWMRDFEERMNGYGCVVVETPLIVQNEPDEAEQDCIEFGKKIANI------------
General information:
TITO was launched using:
RESULT:
Template:
2FLV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25544 for 853 contacts (-29.9/contact) +
2D Compatibility (PS) -12352 + (NN) -2142 + (LL) 556
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -49482.0 ( -58.01 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_2FLV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FLV-query.scw
PDB file :
Tito_Scwrl_2FLV.pdb
: