Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYF-VAQRALVKAGLHKDTLVDIIFYSALFGFIAARIY-FVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIV-CKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFL-YLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKK-VK---------- |
| 3P06 Chain:A ((1-194)) | NGVELS---------------------AVGVLLPVLMDSGRR-----------------------ISGGAFMAVKGDLSEHIKNPKNT--------RIAQTVAGGTIYGLSEMVNIDEAEKLPIKGAIT---VL------------------PVVQATATSILVPD------------NQPQLAFNS-WEAAACAAD-----TLESQQTPFLMV-----TGAVESGNLSPNLLAVQKQLLVAKPAGIGLAANSDR---ALKVVTLEQLRQVVGDKPWR-KPMVTFSSGKNVAQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229841 for 1475 contacts (-155.8/contact) +
2D Compatibility (PS) -18350 + (NN) 95 + (LL) 7164
1D Compatibility (HY) -2400 + (ID) 2250
Total energy: -245582.0 ( -166.50 by residue)
QMean score : 0.091
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