Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLHFAILFWLALIFLVAATFILVLMK-KTGK-ESKKESYLSF-TVILYIFGFAILIYTFIFGVL
3X29 Chain:A ((83-141))
-------LMVVAVLLGFVAMVLSVVGMK----NPTAKSRVAISGGALFLLAGLCTLTAVSWYA--
General information:
TITO was launched using:
RESULT:
Template:
3X29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56080 for 269 contacts (-208.5/contact) +
2D Compatibility (PS) -5235 + (NN) -4895 + (LL) 1256
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -69304.0 ( -257.64 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_3X29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3X29-query.scw
PDB file :
Tito_Scwrl_3X29.pdb
: