Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFISNNNITDPTLNLAMEEYVLKNLPAEESYFLF-YINRPSIIVGKNQNTIEEVNQTYIDAHNIDVVRRISGGGAVYHDTGNLNFSFITDDDGNSFHNFQKFTEPIVQALQSL--GVNAELTGRNDIQV-GQAKISGNAMVKVKNRMFSHGTLMLNSDLDEVQNALKVNPAKIKSKGIKSVRKRVANIQEFLNDP-LEIEEFKKIILKTIFGETEVEEY-KLTDEDWENIEKLSNDK---YRTWAWNYGRNPKYNFEREEKF--EKGFVQIK--FDVKRGKIEHAKI-FGDFFGVGDVTD-LENALVGCLHDFEHIEEALSEYDLYH-YFGDIDRHELIRLMS |
| 3A7U Chain:A ((18-334)) | --------------NLAVEDWIHDHMNLEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFFTTKKK---YDRMENLKLVVRALKAVHPHLDVQATKRFDLLLDGQFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLK------------------KNLME--KDPTLTCEVVINAVATEYATSHQIDNHIHLINPTDETVFPGINSKAIELQTWEWIYGKTPKFSVDTSFTVLHEQSHVEIKVFIDVKNGRIEVCNIEAPDHWLPLEICDQLNSSLIGS--KFSPIETTVLTSILHRTYPGDDELHS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81739 for 1990 contacts (-41.1/contact) +
2D Compatibility (PS) -29768 + (NN) -6049 + (LL) 3196
1D Compatibility (HY) -16800 + (ID) 4500
Total energy: -135660.0 ( -68.17 by residue)
QMean score : 0.385
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