Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWFKLILDVTTFILIAILLFVYTYKENEEILPDTKYPIAVTDWNKKYSK-NEIYKRINQFAKNENVAIYKSTSNYTNKNVDKDIYVFNKSKATTITPFNAKYNIHYLSDDELLKKDIKGSYFVKDKNFDVSKFINFLKEYGVTAESYKIDHMMIAVGVIKQMNIEVPLSALLIVYFIYYIFEKNINFKAYAIKYLNGFTLRKIIFENFSKKCTYWVTLIISQILLTTSVLWILNYTGNLDLFILRLVLLSCLFILTISVINLWTFLMLLNLNIANMIKGKQHFKTIRFINT-VCKSILLVLIASVMIENTSVIKDLNKIKETEKYWNVLDDYYTIEFAPYHETKQSLIDNMLRSEQLVKASEAENNAILFKPKGDSVDNDNFSPDEGNVILVNNQFWSIYYKQFQPDIPIKNQKNNVEVIIPQKFHAMRNEINQAYHSWFEFVQNKNNKENKLSIQFINKNDYRIFSFDARDSRHLSFIEAPIIVNVQASDLSNDFYYAMISQGGYLFKNYDALVKNIENYHLDGEISGITNYKDSVMEMYHENNLKLTVLNFSQIIIAIILIIIILFDVKYYFEQHRKLLVIKKLYGYSTLRANYQYLLINNIVVVFIGILTNVILHSQYIMMIFATILVVQILLQICSLYYHGRRFNEVIKEF |
| 4DVZ Chain:A ((308-829)) | -------------------LMGSHNGKVSLLYAGDKH-----DWNATVGYKDNVATLINVHMKNGSGLVIAGGEKGIN---NPSFYLYKEDQLTG--------SQRALSQEEIRNKVDFMEFLAQNN----TKLDNLSEKEKEKFQNEIEDFQKDSKAYLDALGND----------RIAFVSKKDTKHSALITEFNNG-------------DLSYTLKDYEKNVTLQGS--------------LKHDGVMFVDYSFNKVAVF-----NLPDLNNLAITSFVRRNLENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAVAEAKSTGNY-----DEVKKAQKDLEKSLRKREHLEKEVEKKLESK----------SGNKKAQANSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLKDFSKSFDEFKNFSKAEETLKALKGSVKDL----------GINPEWISKVENLNAALNEFKNGDF-------SKVTQAKSDLENSVKDVIINQKVTDKVDNLNQAVSVAKAMG---------------------------DFSRVEQVLADLKNFSKEQLAQQAQK--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61708 for 3208 contacts (-19.2/contact) +
2D Compatibility (PS) -47722 + (NN) 768 + (LL) 20608
1D Compatibility (HY) 6000 + (ID) 2800
Total energy: -84854.0 ( -26.45 by residue)
QMean score : 0.154
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