Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MSRKTYEKIANINGMFNM---------------LEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDNPIVDGACYILA--LPEIFNSVDVFESELPF--------SWVYDENGITETMKSLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL-------------- |
| 1RKU Chain:A ((1-206)) | DMEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIRE-FPQFPAVHTYEDLKREFLKASSRSLSL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -50678 for 1070 contacts (-47.4/contact) +
2D Compatibility (PS) -16507 + (NN) -1506 + (LL) 204
1D Compatibility (HY) -6800 + (ID) 800
Total energy: -76087.0 ( -71.11 by residue)
QMean score : 0.084
|
|
|