Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN------------------------
2X43 Chain:S ((1-67))
MDQETR-DQMKNAAAEAKDNVHDKIQELKDDVGNKAAEVRDAVSSTVESIKDKLSGGSSSRASSYTLE
General information:
TITO was launched using:
RESULT:
Template:
2X43.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 34064 for 245 contacts (139.0/contact) +
2D Compatibility (PS) -4811 + (NN) -3359 + (LL) -80
1D Compatibility (HY) -1600 + (ID) 450
Total energy: 23764.0 ( 97.00 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_2X43.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X43-query.scw
PDB file :
Tito_Scwrl_2X43.pdb
: