Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
3PXU Chain:A ((7-160))
----VAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEVLGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRA---FEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEKWLTEK--
General information:
TITO was launched using:
RESULT:
Template:
3PXU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106003 for 1154 contacts (-91.9/contact) +
2D Compatibility (PS) -16171 + (NN) -5339 + (LL) 692
1D Compatibility (HY) -16000 + (ID) 3500
Total energy: -146321.0 ( -126.79 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_3PXU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PXU-query.scw
PDB file :
Tito_Scwrl_3PXU.pdb
: