Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILAEIVKYKQSLLQNGYYQDKLNTLKSVKIQNKKSFINAIEKEPKLAIIAEIKSKSPTVNDLPE-RDLSQQISDYEKYGANAVSILTDEKYFGGSFERLQALTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEVLIEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIHDASDVRKILHSGIDGLLIGEALMRCDNLSEFLPQLKMQKVKS
3T55 Chain:A ((43-246))
--------------------------------------VMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLV-------------------
General information:
TITO was launched using:
RESULT:
Template:
3T55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120274 for 1758 contacts (-68.4/contact) +
2D Compatibility (PS) -21498 + (NN) -6262 + (LL) 4600
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -159784.0 ( -90.89 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3T55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T55-query.scw
PDB file :
Tito_Scwrl_3T55.pdb
: