Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLP---FSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF |
1WNL Chain:A ((16-232)) | ---------------------------------------------------------------------------------------FQEITSTNEFAKTSYL--EEGTVIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDG-RIKWPNDVLVNYKKIAGVLVEGKG-----DKIVLGIGLNVNNKVPN-------GATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRV--KIL----GDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110877 for 1717 contacts (-64.6/contact) +
2D Compatibility (PS) -22657 + (NN) -7599 + (LL) 6920
1D Compatibility (HY) -21600 + (ID) 3650
Total energy: -159463.0 ( -92.87 by residue)
QMean score : 0.431
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