Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKTDLINAVA-EQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK
1IHF Chain:B ((1-88))
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRD---
General information:
TITO was launched using:
RESULT:
Template:
1IHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1868 for 435 contacts (-4.3/contact) +
2D Compatibility (PS) -9048 + (NN) 666 + (LL) 400
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -19200.0 ( -44.14 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1IHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IHF-query.scw
PDB file :
Tito_Scwrl_1IHF.pdb
: