Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVKTPVFLVLNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGYVEDQD |
| 2HJG Chain:A ((6-189)) | --------VAIVGRPNVGKSTIFNRIAGERIS-----------RIYSSAEWLNYDFNLID---------PFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLDN--------NIYDFYS-LGFGEPYPISGTHGLGLGDLLDAVAEHF----KNIPETKYNEEVIQFCL------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128660 for 1108 contacts (-116.1/contact) +
2D Compatibility (PS) -15924 + (NN) -4126 + (LL) 9944
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -152516.0 ( -137.65 by residue)
QMean score : 0.546
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